Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015833686.1_cds_XP_016505358.1_18706
CDS Infomation

[gene=LOC107823247] [db_xref=GeneID:107823247] [protein=probable protein phosphatase 2C 14 isoform X1] [protein_id=XP_016505358.1] [location=complement(join(4174..4602,4889..5068,5155..5325,5752..5919,6124..6432))] [gbkey=CDS]
Sequence

ATGCAGAAAGGCATTTCAACAACCACAGTAATGAATGACAACAATAACATAGCCACTACT
GATGAGAATCAGAACATAAATGCTGATTCTTTCTGTTCTTTGAAACGGAAAAGACCCCCT
AAGATAGAGATCCCCAGTTTGTTGTGTGAGATTCGAGTGAATTCAGAGCCGTGTTTCAAG
AATGATGCAGCTGTCACAAAACATCCCATTTGCTTCAGTGGTCATGGGGTCGGCCTTTTC
TGCCGCAAAGGCAAGAAAACCATCATGGAGGATACCCACAAAATAATTTCTAGCTCAAAT
GTCAAAAGGGGGTTTTTTGGGGTATATGATGGACACGGAGGGCGAAAAGCTGCAGAATTT
GTGGCAGAAAATTTACACTCGTATGTATTTGAAATGCTCGACAATGGTTCCAGTACGACG
AGAGAAAAAGCTATTGAGGCTGCTTATTTGAAAACTGATCAGCGGTTTTTGAAACAGGGT
TTGGGCAGTGGTGTTTGCTGTATCACGGCGTTAATTGAAGGAAAGGAGATTATAGTTTCA
AATTTGGGAGACTGTAGAGCGGTTCTATGCAGAAGTGGAGTTGCTGAAGCCCTCACAATA
GATCATAGAGCTGAGAGGGAGGATGAGCGGAAGAGAATAGAGGATAAGGGAGGATATGTT
GAACTTCACAGAGGAGGTTGGAGAGTACATGGTGTTCTCTCTGTCACCAGAAGCATTGGA
GATTCTCATTTGAAGGATTGGGTACCAGCTAAACCTGACACCAAAACACTCATTTTGGCA
CCAGATATGGAATACCTTGTTTTAGCTTCTGATGGTCTTTGGGATGAGGTGGGCAATCAG
GAGGCTGTGGATATCATAATGCAGTATTGTCCAAGGGAAAAGAGAATGCAACTTCCAGTG
GAAAAGGGAAAGGAATTTTATTGTTTAAGTAGAAGTCCTTCAAAGTTACGACGAGTTCCC
ATAATCAAGTCAAACAGAAGGAAAAGTCATTCGCCGTGCTGTAAGAAAAGTGTCAACAGT
GAAGATGAATTTGGCAATGAAAATGAAAGTCCTCCGAAAAAGGCAAGGCGAGTTTCAACA
ATGAACCAAACAAAGATGATGAAGATGAAAATTCAAGAAAAGAGTGGTTTGAACAAGAAG
CAACCATCCAATGCGCTTGTGGCTGCATGCAGAGAACTTGTAAACCTAGCTGTGTCAAGG
GGTAGTTGGGATGATATCACTGTAATGATAATCGATCTGAGTCACTTCAAATGCTAG

Peptide Sequence

PEP ID

XP_016505358.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 14 isoform X1 [Nicotiana tabacum]
Sequence

MQKGISTTTVMNDNNNIATTDENQNINADSFCSLKRKRPPKIEIPSLLCEIRVNSEPCFK
NDAAVTKHPICFSGHGVGLFCRKGKKTIMEDTHKIISSSNVKRGFFGVYDGHGGRKAAEF
VAENLHSYVFEMLDNGSSTTREKAIEAAYLKTDQRFLKQGLGSGVCCITALIEGKEIIVS
NLGDCRAVLCRSGVAEALTIDHRAEREDERKRIEDKGGYVELHRGGWRVHGVLSVTRSIG
DSHLKDWVPAKPDTKTLILAPDMEYLVLASDGLWDEVGNQEAVDIIMQYCPREKRMQLPV
EKGKEFYCLSRSPSKLRRVPIIKSNRRKSHSPCCKKSVNSEDEFGNENESPPKKARRVST
MNQTKMMKMKIQEKSGLNKKQPSNALVAACRELVNLAVSRGSWDDITVMIIDLSHFKC

Transcript Sequence

Gene sequence data has not been registered.